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  <title><![CDATA[PhD DEfense by Faisal Ahmed]]></title>
  <body><![CDATA[<p><strong>Faisal Ahmed</strong></p>

<p><strong>BioE PhD Defense</strong></p>

<p><strong>Date:&nbsp;</strong>Tuesday, Aug 29, 2017</p>

<p><strong>Time:</strong>&nbsp;9-11 AM</p>

<p><strong>Location:&nbsp;</strong>MRDC Conference Room&nbsp;4211</p>

<p>&nbsp;</p>

<p><strong>Committee members:</strong></p>

<p>Dr. Cyrus Aidun (Advisor)</p>

<p>Dr. Gilda Barabino(Advisor)</p>

<p>Dr. Edward Botchwey</p>

<p>Dr. Brandon Dixon</p>

<p>Dr. Wilbur Lam</p>

<p>&nbsp;</p>

<p><strong>Title:&nbsp;MICROFLUIDIC DEVICES FOR STIFFNESS DEPENDENT ENRICHMENT OF</strong></p>

<p><strong>RED BLOOD CELL SUBPOPULATION</strong></p>

<p>&nbsp;</p>

<p>Red blood cells being the most dominant cell type of blood are often the target of many</p>

<p>hematologic diseases such as sickle cell disease, malaria, spherocytosis and some types of</p>

<p>cancers. In addition to affecting biological properties, these diseases also alter biomechanical</p>

<p>properties such as morphology, size and stiffness of red blood cells. Separating or enriching</p>

<p>the cellular components of blood into subpopulation based on their bio-mechanical</p>

<p>properties and analyzing them have the potential to lead to enhanced strategies for assessment</p>

<p>and treatment of these diseases. Current techniques and equipment for diseased cell</p>

<p>sample enrichment are time consuming, expensive and need well trained professionals to</p>

<p>be conducted. Microfluidic platform based red blood cell enrichment device is one of the</p>

<p>most promising technologies that are currently the subject of considerable interest among</p>

<p>researchers because of its low cost, high throughput, easy operation and the potential to</p>

<p>do enrichment within the physiological flow condition. In this research work, microfluidic</p>

<p>devices were designed, fabricated and tested for enriching red blood cell subpopulations</p>

<p>based on their stiffness from a mixture of stiff and normal red blood cells. In the first portion</p>

<p>of the work, lab developed numerical simulation tools were deployed to study stiffness</p>

<p>dependent margination pattern of red blood cells in high aspect ratio straight microchannels</p>

<p>with rectangular cross-section. Stiff red blood cells were observed to marginate near the</p>

<p>channel walls whereas normal (and hence more deformable) red blood cells were observed</p>

<p>to marginate around the center line of the channel regardless whether cell-cell interaction</p>

<p>was significant or not. Cells of different stiffness reached to their equilibrium locations</p>

<p>faster in channels with smaller cross sections. Increasing flow Reynolds number and hence</p>

<p>the flow rate resulted in stronger segregation between normal and stiff red blood cells for</p>

<p>the whole range of Reynolds numbers for which simulations were run. Increasing cell volume</p>

<p>fraction in solution also boosted separation between cells of different stiffness. Based</p>

<p>on the findings of the simulations, two types of cell enrichment devices were designed and</p>

<p>fabricated, simple straight channel device and multistep device. The simple straight channel</p>

<p>device was tested for a wide range of flow Reynolds number and cell volume fractions.</p>

<p>Simple straight channels were observed to perform better with increasing flow Reynolds</p>

<p>number and cell volume fraction up to certain threshold for each of them, and after that</p>

<p>threshold there was no significant improvement of performance. Numerical simulations</p>

<p>were conducted with parameters matching with some of the experiments and the results</p>

<p>obtained were remarkably close to those from the experiments. Statistical analysis on experimental</p>

<p>data found the effect of individual parameters, flow Reynolds number and cell</p>

<p>volume fraction, to be significant. It also revealed that there was significant interaction between</p>

<p>the factors flow Reynolds number and volume fraction. This implies that the extent</p>

<p>of the effect of one factor (e.g. flow Reynolds number) changes when the value of the</p>

<p>other factor (e.g. volume fraction) varies. The multistep device was also tested for different</p>

<p>combinations of flow Reynolds number and cell volume fraction and, was observed</p>

<p>to perform 1.6 times to 3.15 times better in enriching stiff cells from a mixture of stiff and</p>

<p>normally deformable red blood cells. To our knowledge this is the first study that incorporated</p>

<p>such rigorous multiphysics simulations to support experimental study on stiffness</p>

<p>dependent margination of red blood cells in straight micro-channels. This research work</p>

<p>revealed previously unreported information about stiffness dependent cell enrichment with</p>

<p>simple straight channel microfluidic device and proposed a new device that performed significantly</p>

<p>better than the simple straight channel device.</p>

<p>&nbsp;</p>
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