<nodes> <node id="691861">  <title><![CDATA[ PhD Proposal  by  Taofiq Mohammed]]></title>  <uid>27707</uid>  <body><![CDATA[<p><strong>College of Design – School of Building Construction – PhD Proposal Defense – Taofiq Mohammed</strong></p><p>&nbsp;</p><p><strong>Date:&nbsp;</strong>Tuesday, September 1, 2026</p><p><strong>Time:&nbsp;</strong>2:00 – 4:00 PM EST</p><p><strong>Location:&nbsp;</strong>Caddell Building, Conference Room 212 &amp; Microsoft Teams</p><p><strong>Microsoft Meeting Link</strong>:&nbsp;</p><p><a href="https://teams.microsoft.com/meet/275012286837302?p=tYjHzReQ3Ao5blaC1O" title="https://teams.microsoft.com/meet/275012286837302?p=tYjHzReQ3Ao5blaC1O">https://teams.microsoft.com/meet/275012286837302?p=tYjHzReQ3Ao5blaC1O</a></p><p><strong>Meeting ID:</strong>&nbsp;275 012 286 837 302</p><p><strong>Passcode:</strong>&nbsp;fg7aW3gx</p><p><strong>Committee:</strong></p><ul><li data-list-item-id="e59495ac5f24a98b743778509f8f4ee60">Dr. Ebenezer Fanijo – School of Building Construction, Georgia Tech. (Advisor)</li><li data-list-item-id="e861c28a47f96893bd408b0cdc6c7bf3c">Dr. Baabak Ashuri – School of Building Construction and School of Civil and Environmental Engineering, Georgia Tech.</li><li data-list-item-id="ed225d4b05790458498683c1389e7d325">Dr. Georg Reichard – School of Building Construction, Georgia Tech.</li><li data-list-item-id="ece613ea9354caea9f64dc3570bdd3b80">Dr. Valerie Thomas – School of Industrial and Systems Engineering and School of Public Policy, Georgia Tech.</li><li data-list-item-id="e356399bf611c52f58394af6c1a267bdf">Dr. Moe Sharbaf – EP Power Minerals.</li></ul><p><strong>Title:</strong>&nbsp;Performance Evaluation of Geopolymer Mixes with Alternative Precursors: Mechanical, Microstructural, Durability, and Sustainability Insights</p><p><strong>Abstract</strong></p><p>Geopolymers, synthesized through the alkali activation of aluminosilicate precursors, have emerged as promising alternatives to ordinary Portland cement (OPC) because of their potential for lower carbon emissions, competitive mechanical and durability performance, and enhanced resistance to elevated temperatures. Geopolymer are a family of alumino-silicate binders, which is the result of an inorganic polycondensation reaction; a so-called geopolymerisation. Such reaction yields an amorphous to semicrystalline three-dimensional aluminosilicate frameworks with the general empirical formula of M<em>n</em>{−(SiO2)<em>z</em>–AlO2−}<em>n. wH20</em>&nbsp;- where M is a charge-balancing cation (e.g., Na⁺, K⁺, or Ca²⁺), n is the degree of polycondensation, and z is the Si/Al molar ratio governing geopolymer concrete properties – similar to conventional cement. Although established geopolymer cement commonly rely on aluminosilicate precursors such as fly ash (FA), ground-granulated blast-furnace slag (GGBFS), and metakaolin (MK), each precursor presents distinct limitations related to reactivity, material availability, compositional variability, cost, as well as environmental sustainability and optimization. For instance, FA shows source-dependent compositional variability - reporting up to 25% variation in strength across FA sources, and slow ambient-cured strength development, while GGBFS, despite high reactivity, can exhibit drying shrinkage 2–3 times that of OPC. MK provides more consistent reactivity but has high liquid demand and requires energy-intensive calcination (600–900 °C). Supply is also increasingly constrained: U.S. FA production declined by ~68% from 2002 to 2024, while the shift toward electric-arc-furnace steelmaking reduces availability of GGBFS. These limitations motivate hybrid geopolymer systems combining abundant natural and industrial precursors to exploit complementary physicochemical properties while mitigating individual precursor deficiencies. Analogous to the multi-component strategy of limestone calcined clay cement (LC3), optimized precursor combinations could achieve competitive engineering performance with reduced environmental and economic burdens. Therefore, this study establishes a pathway for translating alternative geopolymer precursors into construction-ready concrete, beginning with precursor reactivity and reaction mechanisms, followed by systematic mixture design, performance and durability validation, and environmental and economic evaluation. Ultimately, these efforts aim to identify a technically robust, low-impact, and cost-competitive binder with demonstrated potential for field implementation.</p><p>Toward this goal, a state-of-the-art review was first conducted to synthesize recent advances in the selection and application of commonly used geopolymer precursors, including FA, GGBFS, and MK, with particular emphasis on their chemical composition and reactivity, geopolymerization mechanisms, microstructural evolution, engineering performance, and system-level sustainability, as well as the key physicochemical factors governing their early-age behavior and long-term durability. The findings showed that performance is particularly governed by the combined effects of precursor chemistry, activator composition, and curing conditions, with FA- and GGBFS-based systems exhibiting distinct reaction pathways dominated by N–A–S–H and C–A–S–H generations, respectively. While both systems demonstrated mechanical and durability performance comparable to or better than OPC, GGBFS-based geopolymer generally exhibited lower energy demand and emissions. Importantly, the review highlighted the role of calcium-rich chemistry in GGBFS-based geopolymer promote C–A–S–H formation and strength development. Together with the need to reduce dependence on conventional precursors, this finding motivated the exploration of alternative calcium-rich industrial materials such as calcium carbide residue (CCR).</p><p>Informed by this review, the first research work investigates CCR, a high-calcium by-product of acetylene production, as a supplementary precursor to partially replace GGBFS and MK in binary and ternary geopolymer binder systems. The goal is to develop a blended geopolymer using an abundant Ca-rich precursor to reduce GGBFS demand while enhancing precursor reactivity and engineering performance while minimizing reliance on FA and MK. Findings showed that selected CCR replacement levels, particularly at lower dosage, achieved strengths comparable to the GGBFS control, while ternary CCR–MK blends retained 96–99% of the control 28-day strength. Microstructural analysis revealed that CCR promoted the formation of hybrid reaction products, while its combination with MK facilitated matrix densification and the development of a more refined geopolymer microstructure. At 20% CCR replacement, embodied carbon decreased from 574.6 to 560.6 kg CO₂-e/m³, while material cost decreased by approximately 6%. &nbsp;These findings demonstrated that CCR can be valorized as a Ca-rich supplementary material to reduce GGBFS consumption, embodied carbon, and material cost while maintaining performance. However, CCR availability is inherently linked to calcium-carbide-based acetylene production, resulting in regional supply constraints and potentially higher transportation costs and motivating the investigation of more widely available natural precursors. More fundamentally, the changes in reaction products and microstructural development observed with alternative precursor substitution demonstrate that replacing conventional precursors can significantly alter geopolymerization pathways. This highlights a critical knowledge gap in how precursor chemistry controls dissolution kinetics and, consequently, gel formation and long-term network development.</p><p>Furthermore, a second mechanistic study, guided by computational modeling, was conducted to establish the relationship between precursor dissolution rate and kinetics and the subsequent evolution and reorganization of the geopolymer network. Real-time measurements using inductively coupled plasma mass spectrometry (ICP-MS) showed rapid early dissolution of Al and Si, with initial rates of approximately 0.605 and 4.697 μmol L⁻¹ s⁻¹, respectively, followed by a transition toward polycondensation. Multiscale characterization further revealed progressive gel growth and surface densification, with surface roughness decreasing by approximately 39% by 7 days and the Si/Al ratio stabilizing at about 1.7 – 1.8 as a dense and chemically stable N–A–S–H network developed. These findings showed that early dissolution behavior directly influences subsequent gel chemistry and structural development, providing reaction-level insight for selecting and combining precursors in the hybrid system.</p><p>This understanding motivated a hybrid precursor system combining highly reactive MK with lower-energy pumice and limestone powder (LP) as the third research objective. MK provides readily available Si and Al, while pumice supplies additional aluminosilicates for continued polycondensation and LP contributes Ca alongside filler and nucleation effects. Their complementary chemistry promotes interactions between N–A–S–H and Ca-containing gels, providing a basis for optimizing reaction kinetics, microstructural development, engineering performance, and overall binder sustainability. To systematically evaluate precursor interactions across the ternary composition space, a full-range augmented simplex lattice design was deployed to establish composition–property relationships for flowability, compressive strength, sorptivity, and drying shrinkage. Multi-response optimization identified a balanced mixture containing approximately 7.4% MK, 75.6% pumice, and 17.0% LP. Experimental validation yielded 106.25% flowability, 3.62 ksi 28-day compressive strength, 0.0447 mm/√s sorptivity, and 0.056% drying shrinkage. Life-cycle assessment showed a GWP of ~374 kg CO₂-e/m³, compared with 543 and 689 kg CO₂-e/m³ for MK-based GPC and OPC, respectively, demonstrating the environmental benefit of increased pumice and LP substitution. However, transport and dimensional-stability responses were highly composition-dependent, with sorptivity varying by &gt;13-fold (0.0062–0.0823 mm/√s) and drying shrinkage by &gt;3-fold (0.042–0.134%), contributing to larger prediction errors during model validation.</p><p>To reduce variability and prediction errors in the initial optimization, the composition space around the initial optimized mixture composition was refined to 5–20% MK, 70–85% pumice, and 10–25% LP, leading to the fourth research goal focused on refining and validating the optimized ternary system. This constrained optimization targets &lt;10% deviation between predicted and experimental responses while identifying a mixture with improved overall performance, including the flowability, compressive strength, sorptivity, and drying shrinkage. The optimized system subsequently undergo integrated life-cycle and techno-economic assessments (LCA- TEA), benchmarked against conventional geopolymer systems to evaluate its environmental impact, production cost, and circular economy. The optimized mixture (9.8% MK, 77.1% pumice, 13.1% LP) achieved 105.48% flowability, 3.83 ksi 28-day strength, 0.042 mm/√s sorptivity, and 0.057% drying shrinkage, with prediction errors of 0.30–5.80%. XRD, FTIR, and SEM-EDS attributed this balanced performance to a dense, silica-rich hybrid C-(N)-A-S-H matrix with moderate Ca incorporation. Compared with conventional geopolymer systems, the mixture demonstrated competitive engineering performance while reducing cost to $286.30/m³ (58.8% below MK-based GPC) and GWP to 378.3 kg CO₂-eq/m³ (30.4% and 10.9% below MK- and slag-based systems, respectively). Strength-normalized analysis further demonstrated improved cost and carbon efficiency relative to MK- and FA-based systems.</p><p>Finally, future work will advance the final optimized binder toward field and application-scale validation as a repair or overlay /concrete pavement. Bond performance with existing concrete will be evaluated through pull-off testing in accordance with ASTM C1583 and slant-shear testing based on ASTM C882, together with other durability testing, to determine its suitability for practical repair and overlay applications. Overall, this research progresses from understanding conventional and alternative precursor behavior to mechanism-informed, sustainability-guided mixture development, optimization, and application-scale validation, with the goal of advancing technically viable, lower-carbon geopolymer binders for practical construction applications.</p><p>&nbsp;</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787337169</created>  <gmt_created>2026-08-21 18:32:49</gmt_created>  <changed>1787337391</changed>  <gmt_changed>2026-08-21 18:36:31</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Performance Evaluation of Geopolymer Mixes with Alternative Precursors: Mechanical, Microstructural, Durability, and Sustainability Insights]]></teaser>  <type>event</type>  <sentence><![CDATA[Performance Evaluation of Geopolymer Mixes with Alternative Precursors: Mechanical, Microstructural, Durability, and Sustainability Insights]]></sentence>  <summary><![CDATA[<p>Performance Evaluation of Geopolymer Mixes with Alternative Precursors: Mechanical, Microstructural, Durability, and Sustainability Insights</p>]]></summary>  <start>2026-09-01T14:00:00-04:00</start>  <end>2026-09-01T16:00:00-04:00</end>  <end_last>2026-09-01T16:00:00-04:00</end_last>  <gmt_start>2026-09-01 18:00:00</gmt_start>  <gmt_end>2026-09-01 20:00:00</gmt_end>  <gmt_end_last>2026-09-01 20:00:00</gmt_end_last>  <times>    <item>      <value>2026-09-01T14:00:00-04:00</value>      <value2>2026-09-01T16:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-09-01 02:00:00</value>      <value2>2026-09-01 04:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Caddell Building, Conference Room 212 &amp; Microsoft Teams]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691850">  <title><![CDATA[PhD Proposal by Ngoc Phuong Dung Ho]]></title>  <uid>27707</uid>  <body><![CDATA[<p>Quantitative Biosciences Thesis Proposal&nbsp;</p><p><strong>Ngoc Phuong Dung Ho</strong><br>School of Chemistry and Biochemistry</p><p>Advisor: Advisor: James C. Gumbart (School of Physics)</p><p>Open to the Community</p><p>&nbsp;</p><p><strong>Across Scales of Regulation: Decoding How Small Molecules Reshape Protein Dynamics, Assembly, and Phase Separation</strong><br>Tuesday, September 1, 2026, at 2:00 pm&nbsp;</p><p>Howey Physics Building, Room W401</p><p>&nbsp;</p><p>Committee Members:</p><p>Jeffrey Skolnick (School of Biological Sciences)</p><p>Andrew McShan (School of Chemistry and Biochemistry)</p><p>Nael A. McCarty (Emory University)</p><p>Abstract:</p><p>Small molecules modulate essential biological processes across diverse spatial and temporal scales, from regulating intramolecular channel gating to remodeling dynamic oligomeric interfaces and dictating the mesoscale material properties of biomolecular condensates. Although structural biology has resolved numerous therapeutic binding pockets, static structures alone cannot explain how ligand binding alters the dynamic conformational ensembles that govern functional outcomes. This thesis establishes an integrated computational and biophysical framework which combines all-atom molecular dynamics, machine-learning-assisted conformational sampling, coarse-grained modeling, and experimental validation to decode small-molecule regulation across distinct biological hierarchies. By elucidating potentiator-driven gating in cystic fibrosis transmembrane conductance regulator (CFTR) channels, targeting transient dimer interfaces in tumor necrosis factor alpha (TNF-α), and resolving drug-induced single-chain collapse in fused in sarcoma (FUS) condensates, this work connects atomistic conformational shifts to emergent mesoscale organization, providing rational principles to accelerate targeted therapeutic discovery.</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787321666</created>  <gmt_created>2026-08-21 14:14:26</gmt_created>  <changed>1787322793</changed>  <gmt_changed>2026-08-21 14:33:13</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Across Scales of Regulation: Decoding How Small Molecules Reshape Protein Dynamics, Assembly, and Phase Separation]]></teaser>  <type>event</type>  <sentence><![CDATA[Across Scales of Regulation: Decoding How Small Molecules Reshape Protein Dynamics, Assembly, and Phase Separation]]></sentence>  <summary><![CDATA[<p><strong>Across Scales of Regulation: Decoding How Small Molecules Reshape Protein Dynamics, Assembly, and Phase Separation</strong></p>]]></summary>  <start>2026-09-01T14:00:00-04:00</start>  <end>2026-09-01T16:00:00-04:00</end>  <end_last>2026-09-01T16:00:00-04:00</end_last>  <gmt_start>2026-09-01 18:00:00</gmt_start>  <gmt_end>2026-09-01 20:00:00</gmt_end>  <gmt_end_last>2026-09-01 20:00:00</gmt_end_last>  <times>    <item>      <value>2026-09-01T14:00:00-04:00</value>      <value2>2026-09-01T16:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-09-01 02:00:00</value>      <value2>2026-09-01 04:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Howey Physics Building, Room W401]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691848">  <title><![CDATA[Ph.D. Dissertation Defense - Albert Cho]]></title>  <uid>28475</uid>  <body><![CDATA[<p><strong>Title</strong><em>:&nbsp; Mitigating Memory System Bottlenecks in Server Architectures with Compute Express Link</em></p><p><strong>Committee:</strong></p><p>Dr.&nbsp;Alexandros Daglis, CS, Chair, Advisor</p><p>Dr.&nbsp;Moinuddin Qureshi, ECE</p><p>Dr.&nbsp;Ada Gavrilovska, CoC</p><p>Dr.&nbsp;Richard Vuduc, CSE</p><p>Dr.&nbsp;Jovan Stojkovic, UT Austin</p>]]></body>  <author>Daniela Staiculescu</author>  <status>1</status>  <created>1787263130</created>  <gmt_created>2026-08-20 21:58:50</gmt_created>  <changed>1787263201</changed>  <gmt_changed>2026-08-20 22:00:01</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Mitigating Memory System Bottlenecks in Server Architectures with Compute Express Link ]]></teaser>  <type>event</type>  <sentence><![CDATA[Mitigating Memory System Bottlenecks in Server Architectures with Compute Express Link ]]></sentence>  <summary><![CDATA[<div>The continued growth of data-intensive applications and increasing processor core counts has made the memory system a fundamental bottleneck in modern server architectures. Conventional DDR memory interfaces are constrained by limited processor pin resources, restricting memory bandwidth, while large multi-socket systems (scale-up) or distributed systems (scale-out) suffer from significant Non-Uniform Memory Access (NUMA) penalties or network overhead for accessing remote memory. The emergence of the Compute Express Link (CXL) provides new opportunities to rethink memory system design through its high-bandwidth, pin-efficient, and memory-sharing capabilities. This thesis presents CXL-based architectural techniques that address memory bottlenecks across individual servers, scale-up systems, and scale-out systems. COAXIAL targets the individual server level by replacing conventional DDR channels with CXL in throughput-oriented manycore processors. This pin-efficient interface substantially increases available memory bandwidth, reducing contention and improving the performance of bandwidth-intensive workloads. StarNUMA targets scale-up systems by augmenting large multi-socket NUMA architectures with a centralized CXL memory pool. By placing heavily shared vagabond pages in shared memory, StarNUMA reduces remote memory accesses and improves the efficiency of shared-memory execution. CLEAR targets scale-out systems by accelerating Tensor Parallel LLM inference across distributed servers. It replaces network-centric AllReduce communication with an active CXL memory pool featuring in-memory reduction hardware, enabling collective operations to be performed through centralized shared-memory reductions. Together, these contributions demonstrate how CXL can be leveraged to address memory bandwidth, latency, and communication bottlenecks at multiple levels of server architecture, providing a scalable foundation for future high-performance computing systems.</div>]]></summary>  <start>2026-08-26T13:00:00-04:00</start>  <end>2026-08-26T15:00:00-04:00</end>  <end_last>2026-08-26T15:00:00-04:00</end_last>  <gmt_start>2026-08-26 17:00:00</gmt_start>  <gmt_end>2026-08-26 19:00:00</gmt_end>  <gmt_end_last>2026-08-26 19:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-26T13:00:00-04:00</value>      <value2>2026-08-26T15:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-26 01:00:00</value>      <value2>2026-08-26 03:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Room 2100, Klaus]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>          <link>        <url><![CDATA[https://teams.microsoft.com/meet/231540254466344?p=wz37kfBGWXjBDH56iD]]></url>        <title><![CDATA[Microsoft Teams Link ]]></title>      </link>      </related>  <files>      </files>  <groups>          <group id="434381"><![CDATA[ECE Ph.D. Dissertation Defenses]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="100811"><![CDATA[Phd Defense]]></keyword>          <keyword tid="1808"><![CDATA[graduate students]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691847">  <title><![CDATA[Ph.D. Dissertation Defense - Zhongdi Peng]]></title>  <uid>28475</uid>  <body><![CDATA[<p><strong>Title</strong><em>:&nbsp; Heterogeneous Platforms for Ultra-Fast and Low-Power Active Integrated Photonic Structures</em></p><p><strong>Committee:</strong></p><p>Dr.&nbsp;Ali Adibi, ECE, Chair, Advisor</p><p>Dr.&nbsp;Stephen Ralph, ECE</p><p>Dr.&nbsp;Benjamin Klein, ECE</p><p>Dr.&nbsp;John Cressler, ECE</p><p>Dr.&nbsp;Phillip First, Physics</p>]]></body>  <author>Daniela Staiculescu</author>  <status>1</status>  <created>1787262924</created>  <gmt_created>2026-08-20 21:55:24</gmt_created>  <changed>1787262996</changed>  <gmt_changed>2026-08-20 21:56:36</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Heterogeneous Platforms for Ultra-Fast and Low-Power Active Integrated Photonic Structures ]]></teaser>  <type>event</type>  <sentence><![CDATA[Heterogeneous Platforms for Ultra-Fast and Low-Power Active Integrated Photonic Structures ]]></sentence>  <summary><![CDATA[<p>The objective of this dissertation is to develop heterogeneous photonic platforms and device architectures that improve the performance of electro-photonic devices and interconnects for next-generation optical communications. The research focuses on achieving low optical loss, high-speed operation, compact footprint, and low power consumption through the integration of various material platforms. Conventional single-material photonic platforms often require tradeoffs between passive optical performance and active electro-optic modulation performance, motivating the development of heterogeneous architectures that leverage the unique properties of different materials. Heterogeneous silicon nitride (SiN)- on -lithium niobate (LN) platform are investigated and demonstrated using multiple kinds of SiN materials along with various integration approaches. These platforms enable the development of high-performance photonic devices for communications systems, including a high-efficiency, low-cost frequency converter and a high-speed, low-loss coupling modulator. The results demonstrate the potential of heterogeneous SiN–LN integration to simultaneously enhance passive and active electro-optic functionality. It also presents the researches of CMOS-compatible silicon photonics in multi-project-wafer (MPW) tapeout through monolithic integration of electronics and photonics on a heterogeneous platform. Building on this platform, CMOS-photonic-based thermal-optic tuning and low-loss electro-photonic co-packaging are demonstrated for optical communication applications. Together, these developments establish heterogeneous integration as a promising pathway toward high-performance, energy-efficient, and scalable electro-photonic systems for next-generation communications.</p>]]></summary>  <start>2026-08-26T11:00:00-04:00</start>  <end>2026-08-26T13:00:00-04:00</end>  <end_last>2026-08-26T13:00:00-04:00</end_last>  <gmt_start>2026-08-26 15:00:00</gmt_start>  <gmt_end>2026-08-26 17:00:00</gmt_end>  <gmt_end_last>2026-08-26 17:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-26T11:00:00-04:00</value>      <value2>2026-08-26T13:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-26 11:00:00</value>      <value2>2026-08-26 01:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Room W218, Van Leer]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>          <link>        <url><![CDATA[https://teams.microsoft.com/meet/215139061298926?p=NFmIrWxnsv0x0oOtG9]]></url>        <title><![CDATA[Microsoft Teams Link ]]></title>      </link>      </related>  <files>      </files>  <groups>          <group id="434381"><![CDATA[ECE Ph.D. Dissertation Defenses]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="100811"><![CDATA[Phd Defense]]></keyword>          <keyword tid="1808"><![CDATA[graduate students]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691846">  <title><![CDATA[Ph.D. Dissertation Defense - Shang Jen Su]]></title>  <uid>28475</uid>  <body><![CDATA[<p><strong>Title</strong><em>:&nbsp; Quantum Ring States, Covert Communication over Bosonic Channels, and Quantum Secure Direct Communication</em></p><p><strong>Committee:</strong></p><p>Dr.&nbsp;Matthieu Bloch, ECE, Chair, Advisor</p><p>Dr.&nbsp;John Barry, ECE</p><p>Dr.&nbsp;Viveck Cadambe, ECE</p><p>Dr.&nbsp;Yanbao Zhang, ORNL</p><p>Dr.&nbsp;Robert Clark, Physics</p>]]></body>  <author>Daniela Staiculescu</author>  <status>1</status>  <created>1787262723</created>  <gmt_created>2026-08-20 21:52:03</gmt_created>  <changed>1787262803</changed>  <gmt_changed>2026-08-20 21:53:23</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Quantum Ring States, Covert Communication over Bosonic Channels, and Quantum Secure Direct Communication ]]></teaser>  <type>event</type>  <sentence><![CDATA[Quantum Ring States, Covert Communication over Bosonic Channels, and Quantum Secure Direct Communication ]]></sentence>  <summary><![CDATA[<p>Quantum communication exploits superposition and entanglement to enable secure and efficient information transfer. This dissertation investigates two aspects of quantum communication. First, we introduce quantum ring states, a class of non-Gaussian mixed states generated through phase modulation and transmission over lossy thermal bosonic channels. These states admit tractable achievable-rate expressions that approach the quantum capacity in the low-power regime and improve covert communication performance. Second, we develop the theoretical foundations of Quantum-Memory-Free (QMF) Quantum Secure Direct Communication (QSDC), an alternative to QKD-based secure communication. We establish privacy amplification theorems for coded sequences and characterize information leakage arising from non-ideal keys and retransmissions, enabling practical and resource-efficient QMF-QSDC protocols.</p>]]></summary>  <start>2026-08-25T14:00:00-04:00</start>  <end>2026-08-25T16:00:00-04:00</end>  <end_last>2026-08-25T16:00:00-04:00</end_last>  <gmt_start>2026-08-25 18:00:00</gmt_start>  <gmt_end>2026-08-25 20:00:00</gmt_end>  <gmt_end_last>2026-08-25 20:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-25T14:00:00-04:00</value>      <value2>2026-08-25T16:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-25 02:00:00</value>      <value2>2026-08-25 04:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Room 423, TSRB]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>          <link>        <url><![CDATA[https://teams.microsoft.com/meet/221101062853515?p=OguZyzuMBLCdu23pb7]]></url>        <title><![CDATA[Microsoft Teams Link ]]></title>      </link>      </related>  <files>      </files>  <groups>          <group id="434381"><![CDATA[ECE Ph.D. Dissertation Defenses]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="100811"><![CDATA[Phd Defense]]></keyword>          <keyword tid="1808"><![CDATA[graduate students]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691804">  <title><![CDATA[PhD Proposal by Amanda Conde Del Moral]]></title>  <uid>27707</uid>  <body><![CDATA[<p><strong>Amanda Conde Del Moral</strong><br>Advisor: Prof. Juan-Pablo Correa-Baena</p><p><br><em>will propose a doctoral thesis entitled</em>,</p><p><br><strong>Structure–Property Relationships in Lead Halide Perovskites: From Phase Stability to Collective Optical Phenomena</strong></p><p><br><em>On</em></p><p><br>Friday, August 28 at 10:00 a.m.<br>MRDC Room 4211</p><p>and/or&nbsp;</p><p>&nbsp;Virtually via MS Teams&nbsp;</p><p><a href="https://teams.microsoft.com/meet/248586010524518?p=mgQvgezgjq0Ntoto7X">https://teams.microsoft.com/meet/248586010524518?p=mgQvgezgjq0Ntoto7X</a></p><p>&nbsp;</p><p><strong>Committee</strong></p><p>Prof. Juan-Pablo Correa-Baena – School of Material Science and Engineering (advisor)</p><p>Prof. Natalie Stingelin – School of Material Science and Engineering</p><p>Prof. Matthew Sfeir – School of Material Science and Engineering</p><p>Prof. Guoxiang (Emma) Hu – School of Material Science and Engineering</p><p>Prof. Ajay Ram Srimath Kandada – Wake Forest University, Department of Physics<br>Prof. Seth Marder – University of Colorado Boulder, School of Chemical and Biological Engineering&nbsp;</p><p><br><strong>Abstract</strong></p><p>Lead halide perovskites (LHPs) exhibit highly tunable structural and optical properties, yet their performance remains limited by phase instability in 3D systems and exciton–phonon interactions in low‑dimensional analogues. This thesis proposes to investigate how targeted chemical modifications at the organic–inorganic interface govern the ground‑state structural stability and excited‑state lattice response across perovskite dimensionalities. In Objective 1, molecular modulations of phosphonic acids will be used to probe how hydrogen‑bonding interactions stabilize the α‑FAPbI3 phase and suppress formation of the non‑perovskite phases. Objectives 2 and 3 will extend this framework to low‑dimensional perovskites, where the structure and dynamic motion of spacer cations dictate octahedral distortions, lattice flexibility, and exciton–phonon coupling. Objective 2 will establish how monodentate versus bidentate binding modalities and the chemical nature of the anchoring groups modulate the rigidity of the inorganic lattice and its susceptibility to photoinduced deformation, thereby tuning exciton dressing and the scattering pathways that govern dephasing. Building on these insights, Objective 3 will examine how lattice flexibility influences the emergence of superfluorescence by comparing phenethylammonium, chlorinated‑phenethylammonium, and benzene‑based bidentate cations, determining whether molecular control over lattice dynamics can modulate coherence decay and the conditions required for cooperative emission. Together, these proposed studies aim to reveal how organic–inorganic interactions regulate structural stability and photoinduced lattice dynamics, establishing molecular‑level design principles for advancing the optoelectronic and quantum photonic capabilities of lead halide perovskites.</p><p>&nbsp;</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787151256</created>  <gmt_created>2026-08-19 14:54:16</gmt_created>  <changed>1787151289</changed>  <gmt_changed>2026-08-19 14:54:49</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Structure–Property Relationships in Lead Halide Perovskites: From Phase Stability to Collective Optical Phenomena]]></teaser>  <type>event</type>  <sentence><![CDATA[Structure–Property Relationships in Lead Halide Perovskites: From Phase Stability to Collective Optical Phenomena]]></sentence>  <summary><![CDATA[<p>Structure–Property Relationships in Lead Halide Perovskites: From Phase Stability to Collective Optical Phenomena</p>]]></summary>  <start>2026-08-28T10:00:00-04:00</start>  <end>2026-08-28T12:00:00-04:00</end>  <end_last>2026-08-28T12:00:00-04:00</end_last>  <gmt_start>2026-08-28 14:00:00</gmt_start>  <gmt_end>2026-08-28 16:00:00</gmt_end>  <gmt_end_last>2026-08-28 16:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-28T10:00:00-04:00</value>      <value2>2026-08-28T12:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-28 10:00:00</value>      <value2>2026-08-28 12:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[MRDC Room 4211 and/or   Virtually via MS Teams ]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691803">  <title><![CDATA[PhD Proposal by Danae A. Chipoco Haro]]></title>  <uid>27707</uid>  <body><![CDATA[<p><strong>Danae A. Chipoco Haro</strong><br>Advisor: Prof. Marta C. Hatzell. Co-advisor: Prof. Faisal M. Alamgir</p><p><br><em>will propose a doctoral thesis entitled</em>,</p><p><br><strong>Designing catalysts for electrochemical conversion of waste to value-added products</strong></p><p><br><em>On</em></p><p><br>Monday, August 31 at 2:30 p.m.<br>MRDC Room 3515</p><p>&nbsp;</p><p><strong>Committee</strong><br>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Prof. Marta C. Hatzell – School of Chemical and Biomolecular Engineering, George W. Woodruff School of Mechanical Engineering (advisor)<br>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Prof. Faisal M. Alamgir– School of Materials Science and Engineering (co-advisor)</p><p>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Prof. Guoxiang (Emma) Hu – School of Materials Science and Engineering</p><p>      Prof. Preet M. Singh – School of Materials Science and Engineering</p><p>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;Dr. Shawn M. Dirk – Sandia National Laboratories</p><p><br><strong>Abstract</strong><br>Nitrogen- and carbon-containing species circulate through Earth's ecosystems and play essential roles in sustaining life. Nitrogen is a crucial nutrient, while carbon regulates the climate on Earth. However, anthropogenic activities have disrupted these natural cycles, among other factors, through the widespread application of fertilizers and the extensive use of fossil fuels. As a consequence, water bodies are poisoned due to an increase in nutrient concentration. The chemical industry has disrupted the nitrogen and carbon cycle, which is exemplified by the Haber-Bosch process. The Haber-Bosch process synthesizes ammonia, a key chemical in fertilizer production that relies on fossil-derived feedstocks. The excess of nutrients in fertilizers results in a high nitrogen concentration in wastewater, specifically as nitrate. Wastewater treatment plants process wastewater into sludge, but do not transform the sludge into value-added products. The nitrogen that persists in the sludge after treatment (or digestion) is usually in the form of glycine. The present thesis proposes the synthesis of ammonia through the electrochemical conversion of waste, nitrate and glycine, as a strategy to replace fossil-derived resources with waste-derived feedstocks, thereby contributing to the restoration of a more sustainable and circular nitrogen and carbon cycle.</p><p>Nitrate reduction and glycine oxidation may yield several products in addition to ammonia. Thus, achieving an efficient electrochemical conversion of these waste streams requires a fundamental understanding of the reaction mechanisms and rational catalyst design to precisely control the reaction selectivity to ammonia. Regarding nitrate reduction, transition metal hydrides are hypothesized to enhance ammonia selectivity by increasing hydrogen availability at the catalyst surface. However, the role of interstitial hydrogen incorporated within metal lattices remains largely unexplored. However, the role of interstitial hydrogen incorporated within metal lattices remains largely unexplored. This study aims to advance the understanding of interstitial metal hydride catalysts and their potential in catalytic applications. Glycine oxidation can proceed through either C–C or C–N bond cleavage, producing predominantly C₁ or C₂ products, respectively. The factors that govern the competition between these pathways on transition metal surfaces remain poorly understood. Therefore, this work will elucidate the reaction pathway of glycine oxidation on nickel, identify key reaction intermediates associated with C₂ product formation, and evaluate the influence of reaction conditions on C–C and C–N bond cleavage. Overall, this thesis seeks to establish catalyst design principles for the electrochemical conversion of nitrogen-containing waste streams into value-added products, contributing to the remediation of nitrogen and carbon cycles.</p><p>&nbsp;</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787150765</created>  <gmt_created>2026-08-19 14:46:05</gmt_created>  <changed>1787150795</changed>  <gmt_changed>2026-08-19 14:46:35</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Designing catalysts for electrochemical conversion of waste to value-added products]]></teaser>  <type>event</type>  <sentence><![CDATA[Designing catalysts for electrochemical conversion of waste to value-added products]]></sentence>  <summary><![CDATA[<p><strong>Designing catalysts for electrochemical conversion of waste to value-added products</strong></p>]]></summary>  <start>2026-08-31T14:30:00-04:00</start>  <end>2026-08-31T16:30:00-04:00</end>  <end_last>2026-08-31T16:30:00-04:00</end_last>  <gmt_start>2026-08-31 18:30:00</gmt_start>  <gmt_end>2026-08-31 20:30:00</gmt_end>  <gmt_end_last>2026-08-31 20:30:00</gmt_end_last>  <times>    <item>      <value>2026-08-31T14:30:00-04:00</value>      <value2>2026-08-31T16:30:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-31 02:30:00</value>      <value2>2026-08-31 04:30:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[MRDC Room 3515]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691802">  <title><![CDATA[PhD Proposal by Rebecca Kate Banner ]]></title>  <uid>27707</uid>  <body><![CDATA[<p>Rebecca Kate Banner&nbsp;<br>Advisor: Dr. Michael Filler Dr. Eric Vogel</p><p><br><em>will propose a doctoral thesis entitled</em>,</p><p><br><strong>Fluidic Release and Adaptive Interconnection for Distributed Micromodular Manufacturing</strong></p><p><br><em>On</em></p><p><br>Thursday, August 27 at 11 am.<br>Love Building Room 210</p><p>and/or</p><p>&nbsp;Virtually via MS Teams</p><p><strong>Join:&nbsp;</strong><a href="https://teams.microsoft.com/meet/2544541598578?p=fO1Hkfy2luTTnpDsv7">https://teams.microsoft.com/meet/2544541598578?p=fO1Hkfy2luTTnpDsv7</a></p><p><strong>Meeting ID: 254 454 159 857 8</strong></p><p><strong>Passcode: BX26Mq2n</strong></p><p>&nbsp;</p><p>&nbsp;</p><p><strong>Committee</strong><br>Dr. Michael Filler- School of Chemical and Biomolecular Engineering (Advisor)</p><p>Dr. Eric Vogel - School of Materials Science and Engineering (Co-advisor)</p><p>Dr. Victor Breedveld - School of Chemical and Biomolecular Engineering</p><p>Dr. Anju Toor - School of Materials Science and Engineering</p><p>Dr. Juan-Pablo Correa-Baen - School of Materials Science and Engineering</p><p><br><strong>Abstract</strong></p><p>The semiconductor industry has achieved extraordinary control over device performance at the wafer scale, but no existing route reconciles that performance with the substrate flexibility, accessibility, speed, and heterogeneous integration needed for on-demand fabrication of application-specific microelectronics. Fluidic release and adaptive interconnection enable microchiplets, individually fabricated semiconductor devices, to be released into suspension, deposited stochastically, identified by computer vision, and interconnected according to their realized position. However, widespread implementation is limited by challenges in substrate-dependent electrical performance, microchiplet misalignment, scalable release, and control over microchiplet design across the integrated process. Addressing these challenges requires a comprehensive approach spanning substrate compatibility, adaptive interconnection, scalable release and transport, and integrated process design, pursued through four research aims. The first determines which interfacial properties govern adhesion after transfer, establishing design rules for microchiplet transfer across substrate classes. The second addresses microchiplet misalignment through automated, computer-vision-based detection and adaptive routing that wires microchiplets into functional circuits. The third establishes scalable microchiplet release and transport, identifying process conditions that balance release completeness against mechanical integrity. The fourth applies design-space variation across microchiplet size, shape, and process conditions, controlling release, placement, and orientation within the now-integrated flow. By integrating substrate characterization, adaptive interconnection, scalable release, and integrated process design, this work establishes a systematic framework for distributed, fluidic microelectronic manufacturing. The outcomes will provide practical design rules for microchiplet transfer, release, and deposition, enabling scalable, application-matched heterogeneous electronics.</p><p>&nbsp;</p><p>&nbsp;</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787150632</created>  <gmt_created>2026-08-19 14:43:52</gmt_created>  <changed>1787150720</changed>  <gmt_changed>2026-08-19 14:45:20</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Fluidic Release and Adaptive Interconnection for Distributed Micromodular Manufacturing]]></teaser>  <type>event</type>  <sentence><![CDATA[Fluidic Release and Adaptive Interconnection for Distributed Micromodular Manufacturing]]></sentence>  <summary><![CDATA[<p><strong>Fluidic Release and Adaptive Interconnection for Distributed Micromodular Manufacturing</strong></p>]]></summary>  <start>2026-08-27T11:00:00-04:00</start>  <end>2026-08-27T13:00:00-04:00</end>  <end_last>2026-08-27T13:00:00-04:00</end_last>  <gmt_start>2026-08-27 15:00:00</gmt_start>  <gmt_end>2026-08-27 17:00:00</gmt_end>  <gmt_end_last>2026-08-27 17:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-27T11:00:00-04:00</value>      <value2>2026-08-27T13:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-27 11:00:00</value>      <value2>2026-08-27 01:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Love Building Room 210 and/or  Virtually via MS Teams]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691800">  <title><![CDATA[PhD Proposal by Collette Thomas]]></title>  <uid>27707</uid>  <body><![CDATA[<p>Collette Thomas<br>BME PhD Proposal Presentation<br><br>Date: 2026-08-25<br>Time: 2:00pm-4:00pm<br>Location / Meeting Link: Krone Engineered Biosystems Building: Children's Healthcare of Atlanta Seminar Room and <a href="https://emory.zoom.us/j/98374704369">https://emory.zoom.us/j/98374704369</a><br><br>Committee Members:<br>Annabelle Singer; Garrett Stanley; Ming-Fai Fong; Joseph Manns; David Weinshenker<br><br><br>Title: Investigating How the APOE4 Allele Alters Parvalbumin Interneuron Activity and Sharp Wave Ripples During Spatial Reversal Learning&nbsp;<br><br>Abstract:<br>Project Summary and Abstract: Identifying earlier neural circuit changes occurring before cognition is lost is critical for developing early detection and intervention measures before extensive and irreversible neurodegeneration occurs. However, less is known about the neural mechanisms that make the brain vulnerable before symptom onset. Research on Alzheimer’s Disease (AD) is commonly studied after the onset of symptoms, by which point substantial neurodegeneration has already occurred, which limits the effectiveness of current therapeutic interventions. Thus, identifying early circuit-level changes that occur before clinical symptom onset is critical for developing earlier biomarkers and therapeutic strategies. Though APOE4, a variant of the APOE gene, has been identified as the strongest genetic risk factor for AD, previous studies have mainly been done in vitro, in anesthetized animals, or postmortem. Thus, we shift our focus to identifying early circuit-level changes in an APOE genetic risk model of AD in behaving animals. PV interneurons, which are particularly vulnerable in AD, play an essential role in learning and memory and regulate hippocampal SWRs, high-frequency oscillations that occur during quiet wakefulness and sleep, and are required for spatial learning and memory and memory consolidation. Previous work has identified that SWR activity is impaired in APOE4-expressing mice. Additionally, work done in our lab identified a decrease in PV interneurons’ firing rate on approach to reward zones in a spatial navigation task in WT mice and proved that this decrease is necessary for learning reward locations in a novel environment. However, whether there are deficits in PV interneurons in APOE4-expressing mice and whether this contributes to deficits in SWRs has not been investigated. Therefore, this proposal aims to investigate PV interneurons’ neural activity in APOE4-KI expressing mice in the hippocampus, one of the earliest regions affected by AD, to further understand their functional role and their link to neural correlates of memory during spatial reversal learning, defined as learning new reward locations after previously learned ones change within the same environment. We will test the hypothesis that APOE4-KI mice show impaired spatial reversal learning that is correlated with a deficit in goal-related PV activity decreases when compared to APOE3-KI mice, and that this PV interneuron deficit plays a causal role in the associated SWR disruption. We will test this hypothesis by measuring firing rates of PV interneurons in APOE4-KI and APOE3-KI mice (Aim 1) and by using optogenetic manipulation to determine the causal effect of PV interneuron activity on SWRs in APOE4-KI and APOE3-KI (Aim 2). These results will identify early hippocampal circuit dysfunction associated with APOE4 genetic risk long before clinical onset, offering a new perspective on the impact of the APOE4 allele on neural circuits, creating novel prospects for early diagnostic biomarkers and circuit-based therapeutic interventions.&nbsp;</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787150541</created>  <gmt_created>2026-08-19 14:42:21</gmt_created>  <changed>1787150582</changed>  <gmt_changed>2026-08-19 14:43:02</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Investigating How the APOE4 Allele Alters Parvalbumin Interneuron Activity and Sharp Wave Ripples During Spatial Reversal Learning ]]></teaser>  <type>event</type>  <sentence><![CDATA[Investigating How the APOE4 Allele Alters Parvalbumin Interneuron Activity and Sharp Wave Ripples During Spatial Reversal Learning ]]></sentence>  <summary><![CDATA[<p>Investigating How the APOE4 Allele Alters Parvalbumin Interneuron Activity and Sharp Wave Ripples During Spatial Reversal Learning&nbsp;</p>]]></summary>  <start>2026-08-25T14:00:00-04:00</start>  <end>2026-08-25T16:00:00-04:00</end>  <end_last>2026-08-25T16:00:00-04:00</end_last>  <gmt_start>2026-08-25 18:00:00</gmt_start>  <gmt_end>2026-08-25 20:00:00</gmt_end>  <gmt_end_last>2026-08-25 20:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-25T14:00:00-04:00</value>      <value2>2026-08-25T16:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-25 02:00:00</value>      <value2>2026-08-25 04:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Krone Engineered Biosystems Building: Children&#039;s Healthcare of Atlanta Seminar Room ]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691795">  <title><![CDATA[PhD Proposal by Vanessa N. Psarras-Román]]></title>  <uid>27707</uid>  <body><![CDATA[<p><strong>PhD&nbsp;Thesis Proposal&nbsp;Announcement</strong></p><p>Student Name: Vanessa N. Psarras-Román</p><p>Thesis Title: Exploring Carbon Molecular Sieves (CMS) Capabilities and Performance as a Carbon Host for Lithium-Sulfur Battery Cathodes</p><p>Thesis Advisor: Dr. Ryan Lively</p><p>Thesis Co-Advisor: N/A</p><p>Committee Members: Dr. Julia Yang (ChBE), Dr. William Koros (ChBE), Dr. Paul Kohl (ChBE), Dr. Matthew McDowell (ME, MSE)</p><p>Date: 8/25/2026</p><p>Time: 10 AM</p><p>Location: Ford ES&amp;T L1120</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787149954</created>  <gmt_created>2026-08-19 14:32:34</gmt_created>  <changed>1787149989</changed>  <gmt_changed>2026-08-19 14:33:09</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Exploring Carbon Molecular Sieves (CMS) Capabilities and Performance as a Carbon Host for Lithium-Sulfur Battery Cathodes]]></teaser>  <type>event</type>  <sentence><![CDATA[Exploring Carbon Molecular Sieves (CMS) Capabilities and Performance as a Carbon Host for Lithium-Sulfur Battery Cathodes]]></sentence>  <summary><![CDATA[<p>Exploring Carbon Molecular Sieves (CMS) Capabilities and Performance as a Carbon Host for Lithium-Sulfur Battery Cathodes</p>]]></summary>  <start>2026-08-25T10:00:00-04:00</start>  <end>2026-08-25T12:00:00-04:00</end>  <end_last>2026-08-25T12:00:00-04:00</end_last>  <gmt_start>2026-08-25 14:00:00</gmt_start>  <gmt_end>2026-08-25 16:00:00</gmt_end>  <gmt_end_last>2026-08-25 16:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-25T10:00:00-04:00</value>      <value2>2026-08-25T12:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-25 10:00:00</value>      <value2>2026-08-25 12:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Ford ES&amp;T L1120]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691790">  <title><![CDATA[PhD Defense by Yuheng Li]]></title>  <uid>27707</uid>  <body><![CDATA[<p>Yuheng Li<br>BME PhD Defense Presentation<br><br>Date: 2026-09-03<br>Time: 9:30 AM EST<br>Location / Meeting Link: <a href="https://emory.zoom.us/meetings/97275597738/invitations?signature=C33oepLefYRvMkcT63UIIn6GhZwesuMD7UDVckh5D10">https://emory.zoom.us/meetings/97275597738/invitations?signature=C33oepLefYRvMkcT63UIIn6GhZwesuMD7UDVckh5D10</a><br><br>Committee Members:<br>Xiaofeng Yang, Ph.D (advisor); Wang Yun, Ph.D; Judy Wawira Gichoya, MD; John Oshinski, Ph.D; Xiao Hu, Ph.D<br><br><br>Title: Learning transferable CT representations for radiology and radiation oncology<br><br>Abstract:<br>Computed tomography (CT) is central to radiology and radiation oncology. In diagnostic imaging, CT supports the detection, localization, and characterization of disease. In radiation oncology, it provides the anatomical basis for organ-at-risk (OAR) and tumor delineation, image registration, treatment planning, dose assessment, and longitudinal response evaluation. These applications require models that can represent both normal anatomy and pathological findings across anatomical regions, imaging protocols and contrast phases, and disease populations. However, many existing artificial intelligence methods for CT are developed and evaluated for individual tasks, a single acquisition or contrast protocol, or a specific disease cohort, while relying on extensive expert annotations. Consequently, substantial model redevelopment and additional annotation may be required when the anatomy, imaging characteristics, or disease distribution changes. This dissertation develops and validates a series of representation learning methods that use diverse CT images and radiology reports to build reusable models for CT image analysis. The first part develops anatomy-aware self-supervised methods for CT-based organ and lesion segmentation. SS-UNet leverages masked image modeling with sparse convolutional networks to learn anatomical representations from unlabeled CT volumes. The resulting representations improve robustness and transferability across organ and lesion segmentation tasks in CT, magnetic resonance imaging, and positron emission tomography compared to existing baselines. AnatoMask extends this framework through reconstruction-guided self-masking, further improving segmentation under limited labeled-data settings. The second part develops OpenVocabCT, a vision--language model that aligns CT volumes with both complete radiology reports and organ-level descriptions. This approach enables text-driven segmentation of organs and tumors and improves generalization to varied and previously unseen clinical prompts across public and institutional datasets. The third part extends language supervision to disease-oriented CT interpretation. MedVista3D jointly aligns localized regions and whole CT volumes with semantically enriched radiology text, supporting zero-shot disease classification, medical visual question answering, automated reporting, and transfer to downstream CT imaging tasks. The final part develops FlexiCT, a family of CT foundation models trained through stage-wise pretraining on 266,227 CT volumes from 56 public datasets. FlexiCT supports segmentation, registration, disease classification, tumor-phenotype retrieval, and vision--language analysis within a common model family. To evaluate clinical specialization, DINO-CardiacSeg adapts CT foundation-model to contrast-enhanced radiotherapy simulation CT for segmenting 21 cardiac substructures for dosimetry and cardiotoxicity assessment. Together, these studies develop a progression of representation learning frameworks for radiology and radiation oncology. Image-based self-supervision provides reusable spatial features. Radiology reports introduce flexible clinical concepts and disease semantics. Targeted adaptation extends general CT representations to specialized clinical applications. By reducing dependence on manual annotation and improving robustness across heterogeneous imaging settings, these methods support more scalable CT image analysis, including organ and tumor delineation for treatment planning and disease assessment in diagnostic radiology.</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787148672</created>  <gmt_created>2026-08-19 14:11:12</gmt_created>  <changed>1787148699</changed>  <gmt_changed>2026-08-19 14:11:39</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Learning transferable CT representations for radiology and radiation oncology]]></teaser>  <type>event</type>  <sentence><![CDATA[Learning transferable CT representations for radiology and radiation oncology]]></sentence>  <summary><![CDATA[<p>Learning transferable CT representations for radiology and radiation oncology</p>]]></summary>  <start>2026-09-03T09:30:00-04:00</start>  <end>2026-09-03T11:30:00-04:00</end>  <end_last>2026-09-03T11:30:00-04:00</end_last>  <gmt_start>2026-09-03 13:30:00</gmt_start>  <gmt_end>2026-09-03 15:30:00</gmt_end>  <gmt_end_last>2026-09-03 15:30:00</gmt_end_last>  <times>    <item>      <value>2026-09-03T09:30:00-04:00</value>      <value2>2026-09-03T11:30:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-09-03 09:30:00</value>      <value2>2026-09-03 11:30:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[ZOOM]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="100811"><![CDATA[Phd Defense]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691787">  <title><![CDATA[PhD Proposal by Haeyeon Choi]]></title>  <uid>27707</uid>  <body><![CDATA[<p><strong>PhD&nbsp;Thesis Proposal&nbsp;Announcement</strong></p><p>Student Name: Haeyeon Choi</p><p>Thesis Title: Reduced-Space Global Optimization Algorithms for Flowsheet Models of CO2 Removal and Ammonium Recovery</p><p>Thesis Advisor: Joseph K. Scott</p><p>Thesis Co-Advisor: N/A</p><p>Committee Members: Nikolaos V. Sahinidis (ChBE, ISyE), Matthew Realff (ChBE), Fani Boukouvala (ChBE), Micah S. Ziegler (ChBE)</p><p>Date: 8/28/2026</p><p>Time: 10 a.m.</p><p>Location: Ford ES&amp;T 2229</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787148155</created>  <gmt_created>2026-08-19 14:02:35</gmt_created>  <changed>1787148180</changed>  <gmt_changed>2026-08-19 14:03:00</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Reduced-Space Global Optimization Algorithms for Flowsheet Models of CO2 Removal and Ammonium Recovery]]></teaser>  <type>event</type>  <sentence><![CDATA[Reduced-Space Global Optimization Algorithms for Flowsheet Models of CO2 Removal and Ammonium Recovery]]></sentence>  <summary><![CDATA[<p>Reduced-Space Global Optimization Algorithms for Flowsheet Models of CO2 Removal and Ammonium Recovery</p>]]></summary>  <start>2026-08-28T10:00:00-04:00</start>  <end>2026-08-28T12:00:00-04:00</end>  <end_last>2026-08-28T12:00:00-04:00</end_last>  <gmt_start>2026-08-28 14:00:00</gmt_start>  <gmt_end>2026-08-28 16:00:00</gmt_end>  <gmt_end_last>2026-08-28 16:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-28T10:00:00-04:00</value>      <value2>2026-08-28T12:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-28 10:00:00</value>      <value2>2026-08-28 12:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Ford ES&amp;T 2229]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691786">  <title><![CDATA[PhD Proposal by Travis Harrison-Rawn]]></title>  <uid>27707</uid>  <body><![CDATA[<p>Quantitative Biosciences Thesis Proposal&nbsp;</p><p><strong>Travis Harrison-Rawn</strong><br>School of Chemistry and Biochemistry</p><p>Advisor: Lynn Kamerlin (School of Chemistry and Biochemistry)</p><p>Open to the Community</p><p>&nbsp;</p><p><strong>Loop dynamics of metabolically critical enzymes in&nbsp;</strong><em><strong>mycobacterium tuberculosis</strong></em><br>Tuesday, August 25, 2026 at 11:00am</p><p>Molecular Science and Engineering (MoSE), Room 1226</p><p>&nbsp;</p><p>Committee Members:</p><p>JC Gumbart (School of Physics)<br>Raquel Lieberman (School of Chemistry and Biochemistry)<br>Andrew McShan (School of Chemistry and Biochemistry)</p><p>&nbsp;</p><p>Abstract:</p><p>Tuberculosis (TB) is the most lethal infectious disease on the planet, taking more than 1.2 million lives per year. While the disease is curable, the pathogenic bacterium&nbsp;<em>mycobacterium tuberculosis</em>, is extremely durable and prone to developing multidrug resistance. The persistence of these variants is an ongoing threat to human health globally and the development of novel therapeutics is urgent.</p><p>We propose to computationally characterize enzymes with critical metabolic functions within the bacterium. We will perform physics-based simulations to model the conformational landscapes of triosephosphate isomerase (TPI) and indole-3-glycerol phosphate synthase (IGPS) which take part in glycolysis and tryptophan biosynthesis respectively.&nbsp;</p><p>Structurally, these proteins share a TIM-barrel fold with mobile loops that facilitate ligand coordination required for catalysis. To model these complex conformational changes, we will utilize enhanced sampling simulations in parallel with a dimensionality-reduction technique called time-lagged independent component analysis (tICA). Together, these tools allow us to sample and quantify rare loop transitions at an atomistic resolution. Alongside this approach, we will characterize the allosteric networks that govern these dynamics. Identifying critical allosteric hotspots will enable the screening of selective small molecules aiming to disrupt the loop dynamics essential for catalysis.</p><p>&nbsp;</p><p>&nbsp;</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787148077</created>  <gmt_created>2026-08-19 14:01:17</gmt_created>  <changed>1787148108</changed>  <gmt_changed>2026-08-19 14:01:48</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Loop dynamics of metabolically critical enzymes in mycobacterium tuberculosis]]></teaser>  <type>event</type>  <sentence><![CDATA[Loop dynamics of metabolically critical enzymes in mycobacterium tuberculosis]]></sentence>  <summary><![CDATA[<p><strong>Loop dynamics of metabolically critical enzymes in&nbsp;</strong><em><strong>mycobacterium tuberculosis</strong></em></p>]]></summary>  <start>2026-08-25T11:00:00-04:00</start>  <end>2026-08-25T13:00:00-04:00</end>  <end_last>2026-08-25T13:00:00-04:00</end_last>  <gmt_start>2026-08-25 15:00:00</gmt_start>  <gmt_end>2026-08-25 17:00:00</gmt_end>  <gmt_end_last>2026-08-25 17:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-25T11:00:00-04:00</value>      <value2>2026-08-25T13:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-25 11:00:00</value>      <value2>2026-08-25 01:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Molecular Science and Engineering (MoSE), Room 1226]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="102851"><![CDATA[Phd proposal]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node><node id="691783">  <title><![CDATA[PhD Defense by Aminat Ayomide Ambelorun]]></title>  <uid>27707</uid>  <body><![CDATA[<p>Aminat Ayomide Ambelorun<br>(Advisor: Dr. Alexander Robel)<br>will defend a doctoral thesis entitled,<br>Modeling Iceberg Calving: Stochasticity and Local Sea-Level Coupling<br>On<br>Monday, August 24 at 1:00 p.m.<br>Ford ES&amp;T, Room 3243 (The Ocean Room)<br>Abstract<br>Iceberg calving, the fracture and detachment of glacier ice into the ocean, is one of the dominant sources of ice loss from the Antarctic and Greenland Ice sheets. Despite its importance, calving remains one of the largest sources of uncertainty in projections of future sea-level rise from ice sheet mass loss. This uncertainty arises largely because calving is governed by fracture processes that large-scale ice sheet models cannot resolve directly, along with other interacting physical processes that are not fully represented. These processes produce calving events across a wide range of spatial and temporal scales. However, most large-scale ice sheet models generally parameterize calving using deterministic laws that neglect this intrinsic variability. In this thesis, I address two unsolved problems in the modeling of iceberg calving. First, I develop a mathematical framework for representing iceberg calving as a stochastic process in ice sheet models. Stochastic simulations of the Amundsen Sea Embayment in West Antarctica in a large-scale ice sheet model show that stochastic calving accelerates ice loss by 8.4–32.6% after 100 years relative to simulations with deterministic calving. Second, I identify a positive feedback neglected in previous coupled ice sheet-sea level-solid Earth studies. Simulations of the Amundsen Sea Embayment show that coupling local sea level to both calving and ice flow increases ice volume above flotation loss by 86% after 200 years relative to an uncoupled control. I conclude by discussing how these results motivate stochastic calving parameterizations, improved observational constraints on calving variability, and the inclusion of stochastic calving and coupled calving–sea-level feedback in future ice-sheet projections.<br>Committee:<br>•<br>Dr. Alexander Robel – School of Earth and Atmospheric Sciences (advisor)<br>•<br>Dr. Winnie Chu – School of Earth and Atmospheric Sciences<br>•<br>Dr. Lilian Dove – School of Earth and Atmospheric Sciences<br>•<br>Dr. Annalisa Bracco – School of Earth and Atmospheric Sciences &amp; Senior Scientist, CMCC Foundation<br>•<br>Dr. Hélène Seroussi – Thayer School of Engineering, Dartmouth College</p>]]></body>  <author>Tatianna Richardson</author>  <status>1</status>  <created>1787145958</created>  <gmt_created>2026-08-19 13:25:58</gmt_created>  <changed>1787145994</changed>  <gmt_changed>2026-08-19 13:26:34</gmt_changed>  <promote>0</promote>  <sticky>0</sticky>  <teaser><![CDATA[Modeling Iceberg Calving: Stochasticity and Local Sea-Level Coupling]]></teaser>  <type>event</type>  <sentence><![CDATA[Modeling Iceberg Calving: Stochasticity and Local Sea-Level Coupling]]></sentence>  <summary><![CDATA[<p>Modeling Iceberg Calving: Stochasticity and Local Sea-Level Coupling</p>]]></summary>  <start>2026-08-24T13:00:00-04:00</start>  <end>2026-08-24T15:00:00-04:00</end>  <end_last>2026-08-24T15:00:00-04:00</end_last>  <gmt_start>2026-08-24 17:00:00</gmt_start>  <gmt_end>2026-08-24 19:00:00</gmt_end>  <gmt_end_last>2026-08-24 19:00:00</gmt_end_last>  <times>    <item>      <value>2026-08-24T13:00:00-04:00</value>      <value2>2026-08-24T15:00:00-04:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </times>  <gmt_times>    <item>      <value>2026-08-24 01:00:00</value>      <value2>2026-08-24 03:00:00</value2>      <rrule><![CDATA[  ]]></rrule>      <timezone>America/New_York</timezone>      <timezone_db>America/New_York</timezone_db>      <date_type>datetime</date_type>    </item>  </gmt_times>  <phone><![CDATA[]]></phone>  <url><![CDATA[]]></url>  <location_url>    <url><![CDATA[]]></url>    <title><![CDATA[]]></title>  </location_url>  <email><![CDATA[]]></email>  <contact><![CDATA[]]></contact>  <fee><![CDATA[]]></fee>  <extras>      </extras>  <location><![CDATA[Ford ES&amp;T, Room 3243 (The Ocean Room)]]></location>  <media>      </media>  <hg_media>      </hg_media>  <boilerplate></boilerplate>  <boilerplate_text><![CDATA[]]></boilerplate_text>  <sidebar><![CDATA[]]></sidebar>  <related>      </related>  <files>      </files>  <groups>          <group id="221981"><![CDATA[Graduate Studies]]></group>      </groups>  <categories>          <category tid="1788"><![CDATA[Other/Miscellaneous]]></category>      </categories>  <event_terms>          <term tid="1788"><![CDATA[Other/Miscellaneous]]></term>      </event_terms>  <event_audience>          <term tid="78771"><![CDATA[Public]]></term>      </event_audience>  <keywords>          <keyword tid="100811"><![CDATA[Phd Defense]]></keyword>      </keywords>  <userdata><![CDATA[]]></userdata></node></nodes>